STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS09954.1Internalin-like protein (LPXTG motif). (832 aa)    
Predicted Functional Partners:
AIS09903.1
Hypothetical protein.
 
    0.658
AIS09953.1
Cell surface protein precursor, GY family.
 
    0.655
AIS09085.1
N-acetylmuramidase.
 
     0.621
AIS09955.1
Chitinase.
 
    
0.612
AIS09084.1
N-acetylmuramidase.
  
     0.556
AIS09951.1
Sortase A, LPXTG specific.
 
   
 0.530
AIS09086.1
N-acetylmuramidase.
 
     0.516
AIS09083.1
Internalin B (GW modules).
 
     0.513
AIS09946.1
Transporter, putative.
 
     0.508
AIS09952.1
Cell surface protein precursor, GY family.
 
   
0.501
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.