STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS09966.1PTS system, mannose-specific IIB component. (161 aa)    
Predicted Functional Partners:
AIS09964.1
PTS system, sorbose-specific IID component.
 
 0.997
AIS09965.1
PTS system, mannose-specific IIA component.
 
  
 0.961
AIS08902.1
Phosphocarrier protein of PTS system.
  
 0.955
AIS08392.1
PTS system, sorbose-specific IID component.
 
 
 0.921
AIS08391.1
PTS system, mannose-specific IID component.
 
 
 0.920
AIS08570.1
PTS system, mannose-specific IID component.
 
 
 0.920
AIS08569.1
PTS system, mannose-specific IIC component.
 
 
 0.919
AIS08876.1
PTS system, mannose-specific IID component.
 
 
 0.918
AIS08388.1
PTS system, mannose-specific IID component.
 
 
 0.914
AIS08875.1
PTS system, mannose/fructose/sorbose family, IIC component.
 
 
 0.912
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.