STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS09975.1Ribokinase. (308 aa)    
Predicted Functional Partners:
AIS08443.1
Deoxyribose-phosphate aldolase.
   
 0.948
AIS08501.1
Ribose-phosphate pyrophosphokinase.
  
 0.943
AIS09747.1
Ribose-phosphate pyrophosphokinase.
  
 0.943
AIS09974.1
Ribose ABC transport system, high affinity permease RbsD.
  
  
 0.943
AIS08811.1
Ribose 5-phosphate isomerase A.
   
 0.942
AIS09978.1
Transketolase, N-terminal section.
    
 0.931
AIS08383.1
Deoxyribose-phosphate aldolase.
   
 0.930
AIS09979.1
Transketolase, C-terminal section.
    
  0.926
AIS09716.1
Transketolase.
  
 0.923
AIS10042.1
Transketolase.
  
 0.923
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.