STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS09976.1Pentose isomerase. (482 aa)    
Predicted Functional Partners:
AIS09979.1
Transketolase, C-terminal section.
 
    0.879
AIS09977.1
Pentose utilization regulator, LacI family.
 
   
 0.862
AIS09978.1
Transketolase, N-terminal section.
 
    0.860
AIS09968.1
Hypothetical protein.
 
     0.793
AIS09969.1
Hypothetical protein.
 
   
 0.614
AIS09980.1
Pentose kinase.
 
     0.593
AIS09974.1
Ribose ABC transport system, high affinity permease RbsD.
     
 0.508
AIS09972.1
Ribose ABC transport system, permease protein RbsC.
       0.470
AIS09973.1
Ribose ABC transport system, ATP-binding protein RbsA.
       0.470
AIS09975.1
Ribokinase.
       0.469
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.