STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS09983.1Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps. (446 aa)    
Predicted Functional Partners:
AIS09982.1
Exoenzymes regulatory protein AepA precursor.
       0.775
AIS09174.1
SSU ribosomal protein S1p.
  
    0.630
AIS08963.1
NAD-dependent glyceraldehyde-3-phosphate dehydrogenase.
  
  
 0.626
AIS09999.1
NAD-dependent glyceraldehyde-3-phosphate dehydrogenase.
  
  
 0.626
AIS08425.1
MaoC family protein.
  
 
  0.621
AIS09395.1
Ribonuclease III.
  
 
  0.596
AIS09352.1
Ribosomal protein L7Ae family protein.
    
 0.595
AIS09981.1
Transcriptional regulator, luxR family, associated with agmatine catabolism.
     
 0.502
AIS09008.1
Flavodoxin.
 
    0.413
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.