STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS09990.1PTS system, cellobiose-specific IIC component. (430 aa)    
Predicted Functional Partners:
AIS09992.1
PTS system, cellobiose-specific IIA component.
 
 
 0.994
AIS09989.1
PTS system, diacetylchitobiose-specific IIB component.
 
 
 0.993
AIS08807.1
PTS system, cellobiose-specific IIA component.
 
 
 0.978
AIS08806.1
PTS system, cellobiose-specific IIB component.
 
 
 0.972
AIS09338.1
PTS system, cellobiose-specific IIB component.
 
 
 0.968
AIS09991.1
Outer surface protein of unknown function, cellobiose operon.
 
  
 0.931
AIS08902.1
Phosphocarrier protein of PTS system.
    
 0.908
AIS09341.1
PTS system, cellobiose-specific IIA component.
 
  
 0.904
AIS08808.1
6-phospho-beta-glucosidase.
  
 
 0.828
AIS09340.1
Beta-glucosidase.
 
 
 0.828
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.