STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS10010.12-dehydro-3-deoxygluconate kinase. (341 aa)    
Predicted Functional Partners:
AIS10011.1
4-hydroxy-2-oxoglutarate aldolase.
 
 0.999
AIS09057.1
Ribulose-phosphate 3-epimerase.
  
 0.895
AIS09411.1
Ribulose-phosphate 3-epimerase.
  
 0.895
AIS08960.1
2-deoxy-D-gluconate 3-dehydrogenase.
 
 0.868
AIS08654.1
Starvation sensing protein RspA.
    
 0.834
AIS08696.1
Succinate-semialdehyde dehydrogenase [NAD].
  
  
 0.823
AIS09853.1
Oxidoreductase.
  
  
 0.823
AIS09974.1
Ribose ABC transport system, high affinity permease RbsD.
  
  
 0.664
AIS09933.1
2-amino-3-ketobutyrate coenzyme A ligase.
  
  
 0.657
AIS10012.1
Transcriptional regulator, LacI family.
  
  
 0.617
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.