STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKK29126.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (441 aa)    
Predicted Functional Partners:
AKK29125.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.986
AKK29127.1
Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family.
  
  
 0.970
AKK30797.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.956
AKK25743.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.919
AKK25734.1
Secretion protein EccB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.898
AKK29955.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.844
AKK25735.1
Secretion protein EccC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.816
AKK29124.1
Type VII secretion protein EsxU; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the WXG100 family.
  
  
 0.752
AKK30796.1
Type VII secretion protein EsxT; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the WXG100 family.
  
  
 0.708
AKK28713.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.687
Your Current Organism:
Mycobacterium sp. EPa45
NCBI taxonomy Id: 1545728
Other names: M. sp. EPa45
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.