STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ISF6_1036Beta-ketoadipate enol-lactone hydrolase. (410 aa)    
Predicted Functional Partners:
ISF6_1032
Bis(5'-nucleosyl)-tetraphosphatase, symmetrical; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.
   
  0.868
ISF6_4089
long-chain-fatty-acid--CoA ligase.
   
 0.816
ISF6_1035
3-carboxy-cis,cis-muconate cycloisomerase.
 
 
 0.814
ISF6_1037
Hypothetical protein.
       0.773
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
  0.769
ISF6_0626
Protocatechuate 3,4-dioxygenase, alpha chain.
 
  
 0.752
ISF6_0627
Protocatechuate 3,4-dioxygenase, beta chain.
 
  
 0.752
ISF6_0624
Protocatechuate 3,4-dioxygenase, beta chain.
 
  
 0.690
ISF6_0061
Chorismate mutase I/prephenate dehydratase.
     
 0.667
ISF6_3848
Beta-ketoadipate enol-lactone hydrolase.
  
     0.658
Your Current Organism:
Ideonella sakaiensis
NCBI taxonomy Id: 1547922
Other names: I. sakaiensis, Ideonella sakaiensis Tanasupawat et al. 2016, Ideonella sp. 201-F6, NBRC 110686, TISTR 2288, strain 201-F6
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