Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSCA_00784Fe-4S ferredoxin iron-sulfur binding domain protein. (258 aa)    
Predicted Functional Partners:
CSCA_3215
Pyruvate:ferredoxin oxidoreductase.
     
 0.659
CSCA_1352
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein.
     
 0.650
CSCA_0098
Nitroreductase.
 
  
 0.623
CSCA_2375
Nitroreductase.
 
 
 0.612
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
   
   0.610
CSCA_4803
Class II glutamine amidotransferase.
     
 0.590
CSCA_0079
Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
  
   0.569
CSCA_4065
Hypothetical protein.
 
    0.560
CSCA_0090
Nitroreductase.
 
  
 0.559
CSCA_0234
Selenate reductase YgfK.
  
  
 0.535
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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