Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CSCA_0095PTS system beta-glucoside-specific transporter subunit IIBCA. (623 aa)    
Predicted Functional Partners:
CSCA_0097
Transcription antiterminator.
 
 0.961
CSCA_0096
Beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
 
  
 0.957
CSCA_2758
Phosphocarrier, HPr family.
  
 
 0.919
CSCA_4685
Transcriptional antiterminator, BglG.
 
 0.864
CSCA_2004
Glycoside hydrolase family 1; Belongs to the glycosyl hydrolase 1 family.
 
  
 0.824
CSCA_1322
PTS system, lactose/cellobiose family IIC subunit; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
  
  
 0.737
CSCA_1819
PTS system, glucose-specific IIBC subunit.
 
 
0.713
CSCA_4686
PTS system, glucose subfamily, IIA subunit.
 
 
0.712
CSCA_1321
Phosphotransferase system lactose/cellobiose-specific IIB subunit.
  
  
 0.710
CSCA_1323
Phosphotransferase system PTS lactose/cellobiose-specific IIA subunit.
  
  
 0.698
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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