Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSCA_0115Hydroxyacid dehydrogenase/reductase. (298 aa)    
Predicted Functional Partners:
CSCA_0116
Hydroxyacid dehydrogenase/reductase-like protein.
  
 0.991
CSCA_0117
Ketose-bisphosphate aldolase.
 
  
 0.711
CSCA_0114
RpiR family transcriptional regulator.
 
     0.553
CSCA_3250
Tagatose-bisphosphate aldolase.
 
  
 0.525
CSCA_2278
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit.
 
   
 0.508
CSCA_0118
Gluconate transporter.
  
  
 0.472
CSCA_2637
Enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  
 0.468
CSCA_3692
3-hydroxybutyryl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  
 0.468
CSCA_2354
IclR family transcriptional regulator.
 
     0.461
CSCA_4465
IclR family transcriptional regulator.
 
     0.454
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.