STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSCA_0140Methyl-accepting chemotaxis sensory transducer. (1061 aa)    
Predicted Functional Partners:
CSCA_1238
Chemotaxis protein.
 
 0.987
CSCA_0139
CheW protein.
 
 0.983
cheB
Putative protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 0.977
CSCA_0137
Putative chemotaxis protein CheA.
 
 0.975
CSCA_0141
MCP methyltransferase, CheR-type.
 
 0.974
CSCA_1254
Response regulator receiver modulated CheW protein.
 
 0.964
CSCA_3202
CheW protein.
 
 0.964
CSCA_3209
CheW protein.
 
 0.963
CSCA_3205
CheA signal transduction histidine kinase.
 
 0.960
CSCA_1236
CheW protein.
 
 0.952
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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