Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CSCA_0148 | CSCA_0149 | Hypothetical protein. | Glutaredoxin. | 0.673 |
CSCA_0148 | CSCA_0150 | Hypothetical protein. | Putative transcriptional regulator, ModE family. | 0.672 |
CSCA_0148 | CSCA_0151 | Hypothetical protein. | Molybdenum ABC transporter, periplasmic molybdate-binding protein. | 0.448 |
CSCA_0149 | CSCA_0148 | Glutaredoxin. | Hypothetical protein. | 0.673 |
CSCA_0149 | CSCA_0150 | Glutaredoxin. | Putative transcriptional regulator, ModE family. | 0.785 |
CSCA_0149 | CSCA_0151 | Glutaredoxin. | Molybdenum ABC transporter, periplasmic molybdate-binding protein. | 0.514 |
CSCA_0149 | CSCA_0500 | Glutaredoxin. | Cytochrome c biogenesis protein transmembrane region. | 0.526 |
CSCA_0149 | CSCA_1259 | Glutaredoxin. | HesB-like domain-containing protein; Belongs to the HesB/IscA family. | 0.545 |
CSCA_0149 | CSCA_2676 | Glutaredoxin. | Pyridine nucleotide-disulfide oxidoreductase; Belongs to the sulfur carrier protein TusA family. | 0.747 |
CSCA_0149 | CSCA_3399 | Glutaredoxin. | Hypothetical protein. | 0.518 |
CSCA_0149 | CSCA_3644 | Glutaredoxin. | Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. | 0.903 |
CSCA_0149 | CSCA_5114 | Glutaredoxin. | Hypothetical protein. | 0.493 |
CSCA_0149 | CSCA_5312 | Glutaredoxin. | HesB-related (seleno)protein. | 0.545 |
CSCA_0150 | CSCA_0148 | Putative transcriptional regulator, ModE family. | Hypothetical protein. | 0.672 |
CSCA_0150 | CSCA_0149 | Putative transcriptional regulator, ModE family. | Glutaredoxin. | 0.785 |
CSCA_0150 | CSCA_0151 | Putative transcriptional regulator, ModE family. | Molybdenum ABC transporter, periplasmic molybdate-binding protein. | 0.719 |
CSCA_0151 | CSCA_0148 | Molybdenum ABC transporter, periplasmic molybdate-binding protein. | Hypothetical protein. | 0.448 |
CSCA_0151 | CSCA_0149 | Molybdenum ABC transporter, periplasmic molybdate-binding protein. | Glutaredoxin. | 0.514 |
CSCA_0151 | CSCA_0150 | Molybdenum ABC transporter, periplasmic molybdate-binding protein. | Putative transcriptional regulator, ModE family. | 0.719 |
CSCA_0151 | CSCA_2676 | Molybdenum ABC transporter, periplasmic molybdate-binding protein. | Pyridine nucleotide-disulfide oxidoreductase; Belongs to the sulfur carrier protein TusA family. | 0.478 |
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