STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSCA_0149Glutaredoxin. (88 aa)    
Predicted Functional Partners:
CSCA_3644
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.
  
 0.903
CSCA_0150
Putative transcriptional regulator, ModE family.
       0.785
CSCA_2676
Pyridine nucleotide-disulfide oxidoreductase; Belongs to the sulfur carrier protein TusA family.
  
  
 0.747
CSCA_0148
Hypothetical protein.
       0.673
CSCA_1259
HesB-like domain-containing protein; Belongs to the HesB/IscA family.
  
  
 0.545
CSCA_5312
HesB-related (seleno)protein.
  
  
 0.545
CSCA_0500
Cytochrome c biogenesis protein transmembrane region.
     
 0.526
CSCA_3399
Hypothetical protein.
  
     0.518
CSCA_0151
Molybdenum ABC transporter, periplasmic molybdate-binding protein.
       0.514
CSCA_5114
Hypothetical protein.
  
     0.493
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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