Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSCA_0274Dinitrogenase iron-molybdenum cofactor. (111 aa)    
Predicted Functional Partners:
CSCA_0254
Nitrogenase.
 
 
 0.853
CSCA_0255
NifK4.
 
 
 0.853
CSCA_0245
Nitrogenase molybdenum-iron protein, beta chain.
 
 
 0.835
CSCA_0244
Nitrogenase molybdenum-iron protein, alpha chain.
 
 
 0.825
nifH
Nitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
 
  
 0.591
CSCA_0922
Nitrogenase; Belongs to the NifH/BchL/ChlL family.
 
  
 0.555
CSCA_0915
Nitrogenase; Belongs to the NifH/BchL/ChlL family.
 
  
 0.547
CSCA_0273
Hypothetical protein.
       0.505
CSCA_2675
Permease.
  
     0.505
CSCA_2299
Transcriptional regulator.
  
     0.473
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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