Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSCA_0289Protein of unknown function DUF1638. (245 aa)    
Predicted Functional Partners:
CSCA_0294
Uroporphyrinogen-III decarboxylase-like protein; Belongs to the uroporphyrinogen decarboxylase family.
 
     0.845
CSCA_0290
Cobalamin synthesis protein P47K.
 
     0.808
CSCA_0292
Hypothetical protein.
 
     0.795
CSCA_0291
Hypothetical protein.
       0.773
CSCA_0288
Methionine synthase.
 
     0.750
CSCA_2131
Uroporphyrinogen decarboxylase/methylcobalamin:coenzyme M methyltransferase; Belongs to the uroporphyrinogen decarboxylase family.
 
     0.736
CSCA_2252
uroporphyrinogen-III decarboxylase-like protein; Belongs to the uroporphyrinogen decarboxylase family.
 
     0.731
CSCA_2254
uroporphyrinogen-III decarboxylase-like protein; Belongs to the uroporphyrinogen decarboxylase family.
 
     0.724
CSCA_5050
Dihydropteroate synthase DHPS.
  
     0.647
CSCA_1346
Hypothetical protein.
  
     0.606
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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