Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSCA_0356Transketolase, pyrimidine binding domain (C-terminal subunit). (310 aa)    
Predicted Functional Partners:
CSCA_0021
Transketolase domain protein.
 0.999
CSCA_0355
Transketolase, thiamine diphosphate binding domain (N-terminal subunit).
 0.999
CSCA_2303
Transketolase domain protein.
 0.999
CSCA_4397
Transketolase domain protein.
 0.999
CSCA_0268
Transketolase domain-containing protein.
 0.996
CSCA_2833
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
 
 
 0.949
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
 
 
 0.928
CSCA_0269
1-deoxy-D-xylulose-5-phosphate synthase.
  
  
 
0.914
CSCA_0022
Transketolase subunit B.
  
  
 
0.912
CSCA_2302
Transketolase subunit B.
  
  
 
0.912
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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