Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CSCA_0358Major facilitator superfamily transporter. (442 aa)    
Predicted Functional Partners:
groS
Chaperonin Cpn10; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.
     
 0.632
CSCA_1772
Formate C-acetyltransferase.
     
 0.623
CSCA_0386
Major facilitator superfamily MFS_1.
  
     0.514
CSCA_0378
Major facilitator superfamily MFS_1.
  
     0.509
CSCA_0383
Major facilitator superfamily MFS_1.
  
     0.505
CSCA_2552
Major facilitator superfamily MFS_1.
 
   
 0.488
CSCA_0898
Hypothetical protein.
  
  
 0.463
CSCA_2416
Integral membrane protein TerC.
  
     0.439
CSCA_0359
Fructose-1,6-bisphosphate aldolase.
       0.432
CSCA_2087
Integral membrane protein, YjbE family.
  
     0.420
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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