Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSCA_0458ROK family protein. (400 aa)    
Predicted Functional Partners:
CSCA_1819
PTS system, glucose-specific IIBC subunit.
  
 
 0.891
CSCA_4686
PTS system, glucose subfamily, IIA subunit.
  
 
 0.891
CSCA_0459
Protein of unknown function DUF81.
       0.797
CSCA_0460
Protein of unknown function DUF1634.
       0.796
CSCA_0195
Protein of unknown function DUF1540.
   
    0.508
CSCA_4751
Putative sporulation protein YtxC.
   
    0.508
CSCA_0095
PTS system beta-glucoside-specific transporter subunit IIBCA.
  
 
 0.501
CSCA_1134
Hypothetical protein.
   
    0.469
CSCA_4419
Pyruvate kinase; Belongs to the pyruvate kinase family.
     
 0.455
lgt
Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
       0.453
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.