Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CSCA_0477FUR family transcriptional regulator; Belongs to the Fur family. (152 aa)    
Predicted Functional Partners:
CSCA_0478
Protein of unknown function DUF134; Belongs to the UPF0251 family.
       0.795
AKA70828.1
Ferric uptake regulator, Fur family; Belongs to the Fur family.
  
   
 0.762
CSCA_0476
Dinitrogenase iron-molybdenum cofactor family protein.
       0.754
CSCA_0475
Cobyrinic acid ac-diamide synthase.
 
     0.715
CSCA_0474
Cobyrinic acid ac-diamide synthase.
 
     0.710
CSCA_0473
Dinitrogenase iron-molybdenum cofactor biosynthesis protein.
 
     0.683
CSCA_0472
Mrp protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
       0.611
CSCA_3276
Rubrerythrin.
  
  
 0.608
CSCA_0471
Periplasmic solute binding protein; Belongs to the bacterial solute-binding protein 9 family.
 
  
 0.605
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.577
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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