Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSCA_0485Phage prohead protease, HK97 family. (317 aa)    
Predicted Functional Partners:
CSCA_0491
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase.
 
 
 0.980
CSCA_0008
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase.
 
 
 0.978
CSCA_2066
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase.
 
 
 0.977
CSCA_0009
PfkB domain protein.
 
  
 
0.923
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
  
 0.894
CSCA_2305
Short-chain dehydrogenase/reductase SDR.
 
 
 0.886
CSCA_0007
Altronate dehydratase.
    
 0.885
uxuA-2
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
  
 0.861
CSCA_2833
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
  
 0.860
araB
L-ribulokinase.
  
 
 0.823
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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