Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
uxuAMannonate dehydratase; Catalyzes the dehydration of D-mannonate. (357 aa)    
Predicted Functional Partners:
CSCA_0487
Mannitol dehydrogenase domain protein.
 
 
 0.996
CSCA_0007
Altronate dehydratase.
 
 
 0.955
uxaC-2
Glucuronate isomerase.
 
  
 0.954
uxaC
Glucuronate isomerase.
 
  
 0.919
CSCA_2305
Short-chain dehydrogenase/reductase SDR.
  
 
 0.912
CSCA_0009
PfkB domain protein.
 
  
 0.904
uxuA-2
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
  
  
 
0.901
CSCA_0485
Phage prohead protease, HK97 family.
 
  
 0.894
CSCA_2833
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
     
 0.806
CSCA_3925
Sugar-phosphate isomerase, RpiB/LacA/LacB family.
     
  0.800
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.