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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSCA_0504Serine/threonine kinase related protein. (194 aa)    
Predicted Functional Partners:
htpG
Heat shock protein Hsp90; Molecular chaperone. Has ATPase activity.
    
 0.780
CSCA_1243
Hypothetical protein.
   
 0.730
CSCA_1251
Hypothetical protein.
   
 0.730
CSCA_3871
Phosphoribulokinase / Uridine kinase family protein.
   
 0.695
CSCA_1768
Hypothetical protein.
  
 0.654
CSCA_2836
Protein serine/threonine phosphatase.
  
 0.654
CSCA_1304
TPR repeat-containing protein.
  
 0.652
CSCA_2557
Microtubule-severing ATPase; Belongs to the AAA ATPase family.
   
 0.642
CSCA_0975
Ankyrin.
    
 0.633
CSCA_1849
Ankyrin.
    
 0.633
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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