Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
CSCA_0517ABC transporter related protein. (282 aa)    
Predicted Functional Partners:
CSCA_0535
Binding-protein-dependent transport systems inner membrane component.
 
 0.988
CSCA_0515
Peptide ABC transporter permease.
 
 0.981
CSCA_0521
Peptide ABC transporter permease.
 
 0.977
CSCA_1596
Oligopeptide/dipeptide ABC transporter, permease protein.
 
 0.977
CSCA_0514
Binding-protein-dependent transport systems inner membrane component.
 
 
 0.957
CSCA_0520
Glutathione ABC transporter, permease protein GsiC.
 
 
 0.931
CSCA_0534
Binding-protein-dependent transport systems inner membrane component.
 
 
 0.930
CSCA_1597
Peptide ABC transporter permease.
 
 
 0.930
CSCA_0516
Peptide ABC transporter periplasmic protein.
 
 
 0.925
CSCA_0518
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
0.882
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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