Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CSCA_0525Succinylglutamate desuccinylase/aspartoacylase. (321 aa)    
Predicted Functional Partners:
CSCA_0522
ABC-type dipeptide transport system, periplasmic component.
 
     0.674
CSCA_0523
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component.
 
     0.617
CSCA_0524
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.
       0.543
CSCA_0526
Permease.
       0.536
CSCA_0520
Glutathione ABC transporter, permease protein GsiC.
 
     0.502
CSCA_0521
Peptide ABC transporter permease.
 
     0.494
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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