Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSCA_0529Radical SAM domain-containing protein. (326 aa)    
Predicted Functional Partners:
CSCA_0530
Hypothetical protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
 
    0.951
CSCA_1147
Hypothetical protein.
 
     0.775
CSCA_1146
Glycosyl transferase family 2.
 
   
 0.772
CSCA_0527
Radical SAM domain-containing protein.
 
   
 0.639
CSCA_0528
Hypothetical protein.
 
     0.595
CSCA_0531
Transcriptional regulator, PadR-like family.
  
    0.506
CSCA_5061
uroporphyrin-III C-methyltransferase.
  
  
 0.465
CSCA_1152
Hypothetical protein.
 
   
 0.460
CSCA_3866
SNARE associated Golgi protein.
 
   
 0.457
CSCA_1150
Hypothetical protein.
 
   
 0.416
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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