CSCA_0530 protein (Clostridium scatologenes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

CSCA_0530

Hypothetical protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. (110 aa)

Predicted Functional Partners:

CSCA_0529

0.951

CSCA_1147

0.714

CSCA_1146

0.610

CSCA_0527

0.593

CSCA_0528

0.592

CSCA_2666

0.570

CSCA_0531

0.521

CSCA_2676

0.419

CSCA_2756

0.404

Your Current Organism:

Clostridium scatologenes

NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
CSCA_0527	CSCA_0528	Radical SAM domain-containing protein.	Hypothetical protein.	0.815
CSCA_0527	CSCA_0529	Radical SAM domain-containing protein.	Radical SAM domain-containing protein.	0.639
CSCA_0527	CSCA_0530	Radical SAM domain-containing protein.	Hypothetical protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.	0.593
CSCA_0527	CSCA_0531	Radical SAM domain-containing protein.	Transcriptional regulator, PadR-like family.	0.641
CSCA_0528	CSCA_0527	Hypothetical protein.	Radical SAM domain-containing protein.	0.815
CSCA_0528	CSCA_0529	Hypothetical protein.	Radical SAM domain-containing protein.	0.595
CSCA_0528	CSCA_0530	Hypothetical protein.	Hypothetical protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.	0.592
CSCA_0528	CSCA_2676	Hypothetical protein.	Pyridine nucleotide-disulfide oxidoreductase; Belongs to the sulfur carrier protein TusA family.	0.476
CSCA_0529	CSCA_0527	Radical SAM domain-containing protein.	Radical SAM domain-containing protein.	0.639
CSCA_0529	CSCA_0528	Radical SAM domain-containing protein.	Hypothetical protein.	0.595
CSCA_0529	CSCA_0530	Radical SAM domain-containing protein.	Hypothetical protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.	0.951
CSCA_0529	CSCA_0531	Radical SAM domain-containing protein.	Transcriptional regulator, PadR-like family.	0.506
CSCA_0529	CSCA_1146	Radical SAM domain-containing protein.	Glycosyl transferase family 2.	0.772
CSCA_0529	CSCA_1147	Radical SAM domain-containing protein.	Hypothetical protein.	0.775
CSCA_0530	CSCA_0527	Hypothetical protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.	Radical SAM domain-containing protein.	0.593
CSCA_0530	CSCA_0528	Hypothetical protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.	Hypothetical protein.	0.592
CSCA_0530	CSCA_0529	Hypothetical protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.	Radical SAM domain-containing protein.	0.951
CSCA_0530	CSCA_0531	Hypothetical protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.	Transcriptional regulator, PadR-like family.	0.521
CSCA_0530	CSCA_1146	Hypothetical protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.	Glycosyl transferase family 2.	0.610
CSCA_0530	CSCA_1147	Hypothetical protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.	Hypothetical protein.	0.714

page 1 of 2

Server load: medium (44%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Textmining

Co-occurrence

Databases

Co-expression

© STRING Consortium 2026

Credits

Access

Info

About