Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSCA_0533Extracellular solute-binding protein family 5. (531 aa)    
Predicted Functional Partners:
CSCA_0535
Binding-protein-dependent transport systems inner membrane component.
 
 
 0.984
CSCA_0534
Binding-protein-dependent transport systems inner membrane component.
 
 
 0.980
CSCA_1596
Oligopeptide/dipeptide ABC transporter, permease protein.
 
 0.925
CSCA_0538
ABC transporter related protein.
 
 
 0.921
CSCA_0514
Binding-protein-dependent transport systems inner membrane component.
 
 
 0.917
CSCA_0515
Peptide ABC transporter permease.
 
 
 0.916
CSCA_0520
Glutathione ABC transporter, permease protein GsiC.
 
 
 0.916
CSCA_0521
Peptide ABC transporter permease.
 
 
 0.916
CSCA_0537
ABC transporter related protein.
 
 
 0.911
CSCA_1597
Peptide ABC transporter permease.
 
 
 0.904
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.