Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSCA_0621Arsenite-activated ATPase ArsA. (581 aa)    
Predicted Functional Partners:
CSCA_0620
Arsenical resistance operon trans-acting repressor ArsD.
   
 0.972
CSCA_0619
Transcriptional regulator, ArsR family.
 
   
 0.841
pyrF
Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily.
    
 
 0.737
CSCA_2557
Microtubule-severing ATPase; Belongs to the AAA ATPase family.
  
 
 0.723
CSCA_3699
Rhomboid family protein.
   
 0.719
CSCA_0618
Arsenical-resistance protein.
     
 0.667
CSCA_2573
Sodium/calcium exchanger membrane region.
   
   0.650
ileS
isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily.
    
 
 0.650
CSCA_0434
FRG domain protein.
    
   0.594
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
    
   0.594
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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