Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSCA_0629Two component sensor histidine kinase. (470 aa)    
Predicted Functional Partners:
CSCA_0628
Two-component response regulator.
 
 0.996
CSCA_1800
Two component transcriptional regulator, winged helix family.
 
 
 0.750
CSCA_0156
Two component transcriptional regulator, winged helix family.
 
 
 0.740
CSCA_1020
Two component transcriptional regulator, winged helix family.
 
 
 0.739
CSCA_1159
Two component transcriptional regulator, winged helix family.
 
 
 0.737
CSCA_0184
Two component transcriptional regulator, winged helix family.
 
 
 0.725
CSCA_0498
Two component transcriptional regulator, winged helix family.
 
 
 0.723
CSCA_1822
Two component transcriptional regulator, winged helix family.
 
 
 0.712
CSCA_0433
Two component transcriptional regulator, winged helix family.
 
 
 0.699
CSCA_1278
Two component transcriptional regulator, winged helix family.
 
 
 0.689
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.