STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSCA_0768Auxin Efflux Carrier. (312 aa)    
Predicted Functional Partners:
CSCA_0769
Proprionate catabolism activator, Fis family.
       0.565
CSCA_0379
Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)).
  
  
 0.515
CSCA_0573
Malic enzyme.
  
  
 0.515
CSCA_3853
Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)).
  
  
 0.515
CSCA_4113
Hypothetical protein.
 
     0.490
CSCA_3547
Hypothetical protein.
  
     0.411
CSCA_0767
Aldo/keto reductase.
       0.401
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.