Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSCA_0798Hypothetical protein. (311 aa)    
Predicted Functional Partners:
CSCA_2771
Sporulation protein, YlmC/YmxH family.
  
     0.671
CSCA_0884
Hypothetical protein.
  
   
 0.660
CSCA_4393
Hypothetical protein.
 
  
 0.658
CSCA_2088
Hypothetical protein.
 
     0.621
CSCA_4005
Hypothetical protein.
  
     0.598
CSCA_4521
Putative transcriptional regulator.
 
     0.571
CSCA_3547
Hypothetical protein.
  
  
 0.542
CSCA_4400
Protein of unknown function DUF214; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
   
 
 0.490
CSCA_3516
Spore coat protein, CotS family.
  
     0.484
CSCA_1353
Hypothetical protein.
  
     0.475
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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