Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSCA_0840Ribulose bisphosphate carboxylase, large subunit (rbcL-1); Belongs to the RuBisCO large chain family. (444 aa)    
Predicted Functional Partners:
CSCA_2623
2,3-diketo-5-methylthio-1-phosphopentane phosphatase.
  
  
 0.802
mtnK
5-methylthioribose kinase; Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate.
 
  
 0.733
CSCA_0839
Zinc finger protein.
       0.675
CSCA_3643
Hypothetical protein.
    
 
 0.663
CSCA_4716
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family.
    
 
 0.663
CSCA_0837
Oxidoreductase.
       0.648
CSCA_0838
Pyridine nucleotide-disulfide oxidoreductase.
       0.648
mtnA
Hypothetical protein; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).
 
  
 0.619
CSCA_3667
Homocysteine S-methyltransferase.
   
  
 0.604
pgk
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
    
 0.580
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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