Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSCA_0890Two component transcriptional regulator, LytTR family. (210 aa)    
Predicted Functional Partners:
CSCA_0891
Signal transduction histidine kinase regulating citrate/malate metabolism.
 
  
 0.899
CSCA_4573
Signal transduction histidine kinase, LytS.
 
 
 0.866
CSCA_2314
Putative sensor with HAMP domain.
 
 
 0.862
CSCA_5307
Signal transduction histidine kinase, LytS.
 
  
 0.819
CSCA_1197
Putative sensor with HAMP domain.
 
  
 0.805
CSCA_2154
Sensor histidine kinase-like protein.
 
  
 0.583
CSCA_2504
Signal transduction histidine kinase regulating citrate/malate metabolism.
 
  
 0.468
CSCA_3458
Membrane associated histidine kinase-like ATPase.
 
   
 0.436
CSCA_4215
Sensor histidine kinase.
 
   
 0.436
CSCA_2503
Hypothetical protein.
 
  
 0.433
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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