Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
CSCA_0996Small acid-soluble spore protein alpha/beta type. (66 aa)    
Predicted Functional Partners:
CSCA_0710
GCN5-related N-acetyltransferase.
  
    0.511
CSCA_0995
Transcriptional regulator, MerR family.
       0.501
CSCA_3884
Heat shock protein DnaJ domain protein.
  
     0.465
CSCA_3526
Sporulation protein YqfD.
 
     0.455
CSCA_2237
Hypothetical protein.
  
     0.452
CSCA_0129
Membrane protein of unknown function.
   
    0.429
gpr
Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
  
 0.424
CSCA_4181
Protein of unknown function DUF606.
  
    0.424
CSCA_0997
Hypothetical protein.
       0.423
CSCA_0998
Methyl-accepting chemotaxis protein signaling domain protein.
       0.423
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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