STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSCA_1001Protein of unknown function DUF182. (368 aa)    
Predicted Functional Partners:
CSCA_0230
Molybdopterin dehydrogenase FAD-binding.
 
  
 0.882
CSCA_3243
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding.
 
  
 0.882
CSCA_0784
Xanthine dehydrogenase family protein FAD-binding subunit.
 
 
 0.876
CSCA_1607
Hypothetical protein.
 
  
 0.864
CSCA_3235
Metal dependent phosphohydrolase.
 
  
 0.862
CSCA_0227
Selenium-dependent molybdenum hydroxylase 1.
 
  
 0.855
CSCA_0229
(2Fe-2S)-binding domain protein.
 
  
 0.832
CSCA_0785
Xanthine dehydrogenase family protein, iron-sulfur binding protein.
 
  
 0.832
CSCA_0783
Xanthine dehydrogenase family protein, molybdopterin-binding subunit.
 
  
 0.830
CSCA_0228
Xanthine dehydrogenase.
 
  
 0.828
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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