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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSCA_1027Transcriptional regulator. (232 aa)    
Predicted Functional Partners:
CSCA_1026
Sensory transduction histidine kinase.
 
 0.967
CSCA_0937
Histidine kinase.
 
 0.855
CSCA_3790
Histidine kinase.
 
 0.855
CSCA_1898
Histidine kinase.
 
 0.854
CSCA_2216
Two component sensor histidine kinase.
 
 0.852
CSCA_2276
Histidine kinase.
 
 0.846
CSCA_0446
Histidine kinase.
 
 0.842
CSCA_1760
Multi-sensor hybrid histidine kinase.
 
 
 0.832
CSCA_1024
Permease.
 
     0.820
CSCA_1025
ABC transporter ATPase.
 
     0.789
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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