Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
Experiments
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[Homology]
Score
CSCA_1141Inosine/uridine-preferring nucleoside hydrolase. (290 aa)    
Predicted Functional Partners:
CSCA_1148
Aminoglycoside phosphotransferase.
 
   
 0.839
CSCA_1142
Extracellular solute-binding family protein.
 
     0.832
CSCA_1143
Binding-protein-dependent transport systems inner membrane component.
 
     0.818
CSCA_1144
Binding-protein-dependent transport systems inner membrane component.
 
     0.758
CSCA_1146
Glycosyl transferase family 2.
 
     0.715
CSCA_1147
Hypothetical protein.
 
     0.712
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
     
 0.518
CSCA_1145
ABC transporter related protein; Belongs to the ABC transporter superfamily.
 
     0.502
CSCA_1149
Protein of unknown function DUF224 cysteine-rich region domain protein.
 
     0.495
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
  
 0.495
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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