Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSCA_1145ABC transporter related protein; Belongs to the ABC transporter superfamily. (350 aa)    
Predicted Functional Partners:
CSCA_1144
Binding-protein-dependent transport systems inner membrane component.
 
 0.998
CSCA_1143
Binding-protein-dependent transport systems inner membrane component.
 
 0.997
CSCA_2083
Binding-protein-dependent transport systems inner membrane component.
 
 0.993
CSCA_2084
ABC transporter, permease protein.
 
 0.993
CSCA_2081
ABC transporter substrate-binding protein.
 
 0.979
CSCA_1142
Extracellular solute-binding family protein.
 
  
  0.967
potA
ABC-type spermidine/putrescine transport systems, ATPase components; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
  
  
 
0.910
CSCA_0897
ABC transporter, permease protein.
 
 
 0.828
CSCA_1148
Aminoglycoside phosphotransferase.
 
     0.713
CSCA_0311
Molybdenum ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
   
 0.697
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.