Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSCA_1147Hypothetical protein. (234 aa)    
Predicted Functional Partners:
CSCA_1146
Glycosyl transferase family 2.
   
 0.995
CSCA_1148
Aminoglycoside phosphotransferase.
 
     0.957
CSCA_1149
Protein of unknown function DUF224 cysteine-rich region domain protein.
 
     0.813
CSCA_1144
Binding-protein-dependent transport systems inner membrane component.
 
     0.794
CSCA_0529
Radical SAM domain-containing protein.
 
     0.775
CSCA_1143
Binding-protein-dependent transport systems inner membrane component.
 
     0.762
CSCA_1150
Hypothetical protein.
 
     0.759
CSCA_1152
Hypothetical protein.
 
     0.741
CSCA_0530
Hypothetical protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
 
     0.714
CSCA_1141
Inosine/uridine-preferring nucleoside hydrolase.
 
     0.712
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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