Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSCA_1195Monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family. (345 aa)    
Predicted Functional Partners:
CSCA_1194
ABC transporter related protein.
 
 0.996
CSCA_1193
Periplasmic binding protein/LacI transcriptional regulator.
 
 0.991
CSCA_1192
Periplasmic binding protein/LacI transcriptional regulator.
 
 0.988
CSCA_1196
Monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
 
  
 
0.987
CSCA_2310
ABC transporter related protein.
 
 
 0.919
CSCA_0264
ABC transporter related protein.
 
 
 0.916
rbsA
ABC transporter related protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 
 0.916
rbsA-2
ABC transporter related protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 
 0.915
CSCA_1198
Periplasmic binding protein/LacI transcriptional regulator.
 
 
 0.909
CSCA_4198
Monosaccharide-transporting ATPase.
 
 
 0.906
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.