Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CSCA_1201PfkB domain protein. (339 aa)    
Predicted Functional Partners:
CSCA_1202
Ketose-bisphosphate aldolase.
  
 0.818
rbsA
ABC transporter related protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  
  
 0.784
CSCA_1200
Monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.770
CSCA_1203
YdaE.
 
   
 0.768
CSCA_1198
Periplasmic binding protein/LacI transcriptional regulator.
 
  
 0.665
hisA
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase.
  
    0.604
xylB
Xylulokinase.
 
  
 0.575
CSCA_1819
PTS system, glucose-specific IIBC subunit.
  
  
 0.534
CSCA_4686
PTS system, glucose subfamily, IIA subunit.
  
  
 0.534
CSCA_0424
Sugar phosphate isomerases/epimerase.
 
  
 0.475
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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