Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSCA_1526Peptidase C26. (243 aa)    
Predicted Functional Partners:
CSCA_1525
Amino acid permease-associated region.
 
  
 0.860
CSCA_1527
Amino acid permease-associated region.
 
  
 0.681
CSCA_1528
Amino acid permease-associated region.
 
  
 0.655
CSCA_0844
Glutamine synthetase, type I.
  
  
 0.502
CSCA_1788
Glutamine synthetase catalytic region.
  
  
 0.502
CSCA_4200
Glutamine synthetase catalytic region.
  
  
 0.502
iscS
Cysteine desulfurase NifS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.
  
    0.485
CSCA_4401
Carboxyl-terminal protease; Belongs to the peptidase S41A family.
   
    0.429
CSCA_1274
Transcriptional regulator, XRE family.
  
  
 0.428
CSCA_1999
Transcriptional regulator, XRE family.
  
  
 0.428
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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