Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSCA_1670Hydrogenase (NiFe) small subunit HydA. (277 aa)    
Predicted Functional Partners:
CSCA_1669
Nickel-dependent hydrogenase large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
 0.999
CSCA_1667
Hydrogenase accessory protein HypB.
 
  
 0.949
hypA
Hydrogenase expression/synthesis HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
  
 0.936
CSCA_1666
Hydrogenase maturation protease.
 
  
 0.925
CSCA_0918
(NiFe) hydrogenase maturation protein HypF.
 
 
 
 0.888
CSCA_0920
Hydrogenase formation HypD protein.
 
  
 0.882
CSCA_0921
Hydrogenase expression/formation protein HypE.
 
   
 0.823
CSCA_1671
Cytochrome b5.
 
     0.808
CSCA_0919
Hydrogenase assembly chaperone hypC/hupF.
 
 
 0.807
CSCA_0819
Flavin reductase domain protein FMN-binding.
  
 
 0.645
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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