Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSCA_1733Succinate dehydrogenase. (598 aa)    
Predicted Functional Partners:
CSCA_1735
Succinate dehydrogenase and fumarate reductase iron-sulfur protein.
 
 0.999
CSCA_4946
NADH dehydrogenase (quinone).
  
 
 0.984
CSCA_4329
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit.
  
 
 0.955
CSCA_0811
NADH dehydrogenase (quinone).
  
 
 0.954
CSCA_2650
NADH dehydrogenase (quinone).
  
 
 0.954
CSCA_4330
Hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type.
  
 
 0.954
CSCA_3617
Cat1.
   
 
 0.909
CSCA_5289
Acetyl-CoA hydrolase.
   
 
 0.909
CSCA_1098
NADH ubiquinone oxidoreductase, F subunit, iron sulfur binding protein.
  
 
 0.907
CSCA_4947
Ferredoxin.
  
 
 0.853
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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