Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSCA_1882Small GTP-binding protein. (411 aa)    
Predicted Functional Partners:
CSCA_4473
Radical SAM domain protein.
   
 0.987
CSCA_1808
Thiamine biosynthesis protein ThiH.
  
 0.965
CSCA_1881
Fumarate lyase.
 
  
 0.875
CSCA_4183
Hypothetical protein.
 
    0.795
CSCA_1809
Hypothetical protein.
 
    0.793
CSCA_4949
Hydrogenase, Fe-only.
 
   
 0.792
CSCA_2801
GTP1/OBG protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
 
 
 0.776
CSCA_0810
Hydrogenase, Fe-only.
 
   
 0.775
CSCA_4943
Uptake hydrogenase.
 
   
 0.772
CSCA_2651
Hydrogenase, Fe-only.
 
   
 0.770
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.