STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSCA_1978Hypothetical protein. (248 aa)    
Predicted Functional Partners:
CSCA_1977
Periplasmic binding protein.
 
    0.863
CSCA_1979
Formylmethanofuran dehydrogenase subunit E region.
 
    0.774
CSCA_1975
Molybdenum cofactor synthesis domain-containing protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
    0.653
CSCA_1976
Hypothetical protein.
       0.580
CSCA_2474
ABC transporter related protein.
 
    0.528
CSCA_5048
Hypothetical protein; Belongs to the uroporphyrinogen decarboxylase family.
  
    0.446
CSCA_2253
Transporter protein.
  
     0.417
CSCA_2467
ABC transporter.
 
    0.413
CSCA_1762
Molybdenum-pterin-binding protein.
 
     0.412
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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