Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CSCA_1989 | CSCA_1991 | CSCA_1989 | CSCA_1991 | Hypothetical protein. | Hypothetical protein. | 0.444 |
CSCA_1989 | CSCA_1992 | CSCA_1989 | CSCA_1992 | Hypothetical protein. | Peptidase dimerization domain protein. | 0.454 |
CSCA_1991 | CSCA_1989 | CSCA_1991 | CSCA_1989 | Hypothetical protein. | Hypothetical protein. | 0.444 |
CSCA_1991 | CSCA_1992 | CSCA_1991 | CSCA_1992 | Hypothetical protein. | Peptidase dimerization domain protein. | 0.503 |
CSCA_1992 | CSCA_1989 | CSCA_1992 | CSCA_1989 | Peptidase dimerization domain protein. | Hypothetical protein. | 0.454 |
CSCA_1992 | CSCA_1991 | CSCA_1992 | CSCA_1991 | Peptidase dimerization domain protein. | Hypothetical protein. | 0.503 |
CSCA_1992 | CSCA_1994 | CSCA_1992 | CSCA_1994 | Peptidase dimerization domain protein. | Transporter major facilitator superfamily MFS_1. | 0.656 |
CSCA_1992 | CSCA_1995 | CSCA_1992 | CSCA_1995 | Peptidase dimerization domain protein. | Peptidase M20. | 0.543 |
CSCA_1992 | CSCA_3151 | CSCA_1992 | CSCA_3151 | Peptidase dimerization domain protein. | Flagellar motor switch protein FliG. | 0.496 |
CSCA_1992 | CSCA_3193 | CSCA_1992 | CSCA_3193 | Peptidase dimerization domain protein. | Flagellin. | 0.467 |
CSCA_1992 | argC | CSCA_1992 | CSCA_2955 | Peptidase dimerization domain protein. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.477 |
CSCA_1992 | argG | CSCA_1992 | CSCA_3659 | Peptidase dimerization domain protein. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.456 |
CSCA_1992 | glmS-2 | CSCA_1992 | CSCA_4359 | Peptidase dimerization domain protein. | Glucosamine/fructose-6-phosphate aminotransferase, isomerizing; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.542 |
CSCA_1992 | menC | CSCA_1992 | CSCA_1993 | Peptidase dimerization domain protein. | O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB). | 0.767 |
CSCA_1994 | CSCA_1992 | CSCA_1994 | CSCA_1992 | Transporter major facilitator superfamily MFS_1. | Peptidase dimerization domain protein. | 0.656 |
CSCA_1994 | CSCA_1995 | CSCA_1994 | CSCA_1995 | Transporter major facilitator superfamily MFS_1. | Peptidase M20. | 0.610 |
CSCA_1994 | menC | CSCA_1994 | CSCA_1993 | Transporter major facilitator superfamily MFS_1. | O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB). | 0.779 |
CSCA_1995 | CSCA_1992 | CSCA_1995 | CSCA_1992 | Peptidase M20. | Peptidase dimerization domain protein. | 0.543 |
CSCA_1995 | CSCA_1994 | CSCA_1995 | CSCA_1994 | Peptidase M20. | Transporter major facilitator superfamily MFS_1. | 0.610 |
CSCA_1995 | CSCA_3151 | CSCA_1995 | CSCA_3151 | Peptidase M20. | Flagellar motor switch protein FliG. | 0.496 |
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