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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSCA_1998Formate C-acetyltransferase. (789 aa)    
Predicted Functional Partners:
CSCA_0865
Glycyl-radical enzyme activating protein family.
 
  
 0.888
CSCA_1773
Pyruvate formate-lyase-activating enzyme.
 
  
 0.888
CSCA_1996
Glycyl-radical enzyme activating protein family.
 
  
 0.888
cutD
Glycyl-radical enzyme activating protein family; Catalyzes activation of the choline trimethylamine-lyase CutC under anaerobic conditions by generation of an organic free radical on a glycine residue, via an homolytic cleavage of S-adenosyl-L-methionine (SAM).
 
  
 0.888
csdA
4-hydroxyphenylacetate decarboxylase activating enzyme; Activation of 4-hydroxyphenylacetate decarboxylase under anaerobic conditions by generation of an organic free radical.
 
  
 0.888
CSCA_5158
(Formate-C-acetyltransferase)-activating enzyme.
 
  
 0.851
CSCA_5135
Pyruvate formate-lyase activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family.
 
  
 0.805
CSCA_2820
Phosphate acetyltransferase.
   
 
 0.599
CSCA_2555
Pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit.
    
 0.597
CSCA_2556
Pyruvate ferredoxin/flavodoxin oxidoreductase.
    
 0.597
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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