STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSCA_2008Iron-containing alcohol dehydrogenase. (388 aa)    
Predicted Functional Partners:
CSCA_3620
Hypothetical protein.
 
 0.936
CSCA_4495
Acetaldehyde dehydrogenase (acetylating).
 
 0.930
CSCA_1619
Aldehyde-alcohol dehydrogenase.
 
 0.926
CSCA_4482
Aldehyde dehydrogenase family protein.
 
 0.920
CSCA_5280
Aldehyde Dehydrogenase.
 
 0.788
CSCA_4448
Alcohol dehydrogenase zinc-binding domain protein.
   
 
 0.580
CSCA_2007
Methyl-accepting chemotaxis sensory transducer.
  
    0.499
glgA
Glycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
  
 0.497
CSCA_3215
Pyruvate:ferredoxin oxidoreductase.
  
  
 0.452
CSCA_1352
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein.
  
  
 0.419
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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